Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932720.1_cds_XP_016479156.1_70726
CDS Infomation

[gene=LOC107800492] [db_xref=GeneID:107800492] [protein=homeobox-leucine zipper protein GLABRA 2-like isoform X3] [protein_id=XP_016479156.1] [location=join(24185..24268,24441..24694,25061..25178,26087..26293,26366..26740,27744..27953,28251..28425,28621..28898,29001..29087,29213..29590)] [gbkey=CDS]
Sequence

ATGAAATTTGTGGACATGTCGAACAACACTCCTTCTAATTCTCACGCCAAAGATTTTGCA
TCTCCTGCTCTCACTCTCAGTCTTGCTGGTATTTTCCGAGATGGTGCAGCTGGAAACGAG
GAGACGGAGGAGGTTGACGACGGAAGTGCCGGCGGTGGCCGGAGAGAAGAGACGACGATG
GTTGAGATTAGCAGTGAGAATTCTGTACCCCTGATGAGTACTTTATCACGCTCTCGTGAT
GATTTTGATGCCGAAAACGAAGACTACGACGACCCCACCAACAGTAAGAAGAAGAAGTAC
CACAGACACACTGCACATCAAATCAGAGAATTGGAGGCCTTATTTAAGGAGTCACCCCAT
CCAGATGAGAAGCAGAGGCAGCAGCTAAGCAACCAATTGGGTCTTCATCCGAGGCAAGTT
AAGTTCTGGTTTCAGAATAGAAGAACCCAAATTAAGGCTATACAGGAGCGCCATGAAAAT
TCATTGTTAAAAACTGAAATAGATAAACTTAGTGAGGTAAATAAAGCATTAAGGATGGCC
ATGAAAAAAAATATTCCTTCTTGTCCTAGTTGTGGGTTTTCTAGCTCCAGCAAGGAGGCT
GCTGTTGTAATTCCCACTCAAGAACAACAGCTACGTATTGAAAATGCCAGACCTAAAACC
GAGGTTGAAAAACTTAGGGCAGAACTGGGAAAATACACAAAAGGGACATCGCCTACTACT
AGTTCAGGAGGGAATGACGAAGAAAATAAAAATGGTTTAGAATTGCAGACAGACACTTTT
GGGCTTGAAAAGTCACGGATTATGGATATTGTTAATCAAGCAACTGAGGAGCTTAAAAAG
ATGGCTACTTTTGGAGAACCACTGTGGATCAAAAGCTTTGAGACTGGAAGAGAAATACTT
AATTACGACGAATATATGAAGGAATTTCCAACAGAAAAGTCAGGAGAAGAACGGCTTACA
AGATCTATTGAGGCATCCAGGGACACTGGAGTAGTATCTATGGATTTGCCTCGGCTTGTC
CAGTGTTTTATGGACGTCATGTTTGCAGAACTGCAGATGCTAACACCGGTTGTGGGCACG
AGGAAAGTATACTTTCTCAGATACTGCAAACAATTAGGTGCAGATCAGTGGGCAATTGTG
GACGTTTCTGTGGACAAGGTTGAGGACAATATAGACGCATCTCTCATGAAATGTAGAAAA
TTACCCTCTGGCTGCATTCTCCAAGATCAATCCAATGCCCACTGTAAGGTGACCTGGGTG
GAGCACTTGGAGTGCCAGCAGAGCACAGTTCATTCTCTCTACCATGCAATTGTCAATAGC
GGCCAAGCTTTTGGAGCGAGGCACTGGATGGCTACACTGCAGCAGCAATGTGAGCGCCTA
ACCTTCTTCAAGGCAACCAGCGTTCGCATAAAAGATTCAACGGGACCAGATGTTGCTACA
CTTGCTGGGCGAAAAAGCATACTTAAATTAGCACAAAGAATGACCTGGAGTTTCTGCCAT
GCTATTGGGGCATCTAGTTATAACAAATGGGACAAGATTCACAGCAAAACCGGAGATGAT
ATTAGGGTGGCGTCTAGGAAGAACTTAACAGATCCTCGGGAACCATTTGGTCTGATCCTC
TGTGCAACTTCATCTGTTTGGCTGCCTGTTTCTCGCAATGTACTATTTGATTTCCTAAGA
GATGAAACCCGCCAACATGAGTGTAATATCATGTCAAATGGAGGCCCCGTGGAGTCCATT
GCAAATTTAGCAACGGGTCAGGACAGAGGAAATGCAGTTACTATCCAAGCAATGAAATTG
AAAGAAGACATGTGGATCCTCCAAGATACCTGCACGAATGCTTATGAATCCACAGTCGTA
TATGCCCCCATCGACATTGGAGGCATGAAATCTGTCATGACCGGCCGTGACTCTAGCAAT
GTTGCAGTGTTACCTTCAGGTTTCTCAATTCTTCCGGATGGCCTCGAGTCAAGGTCTTTA
GTTATCACTTCTAGACCAGAGGAAAAATGTACAGGAGGAGGATCCCTACTAACAGTTCTA
TATCAAATTCTAACTAGCAACTCTCCAGCAGTGAAACTTTCTAAGGAGTCTGTTGAATCA
GTTAACAATCTCATATCATGTACATTGCACAGGATCAAGACAAGTTTGCAATGTGAAGAT
GGGTAG

Peptide Sequence

PEP ID

XP_016479156.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein GLABRA 2-like isoform X3 [Nicotiana tabacum]
Sequence

MKFVDMSNNTPSNSHAKDFASPALTLSLAGIFRDGAAGNEETEEVDDGSAGGGRREETTM
VEISSENSVPLMSTLSRSRDDFDAENEDYDDPTNSKKKKYHRHTAHQIRELEALFKESPH
PDEKQRQQLSNQLGLHPRQVKFWFQNRRTQIKAIQERHENSLLKTEIDKLSEVNKALRMA
MKKNIPSCPSCGFSSSSKEAAVVIPTQEQQLRIENARPKTEVEKLRAELGKYTKGTSPTT
SSGGNDEENKNGLELQTDTFGLEKSRIMDIVNQATEELKKMATFGEPLWIKSFETGREIL
NYDEYMKEFPTEKSGEERLTRSIEASRDTGVVSMDLPRLVQCFMDVMFAELQMLTPVVGT
RKVYFLRYCKQLGADQWAIVDVSVDKVEDNIDASLMKCRKLPSGCILQDQSNAHCKVTWV
EHLECQQSTVHSLYHAIVNSGQAFGARHWMATLQQQCERLTFFKATSVRIKDSTGPDVAT
LAGRKSILKLAQRMTWSFCHAIGASSYNKWDKIHSKTGDDIRVASRKNLTDPREPFGLIL
CATSSVWLPVSRNVLFDFLRDETRQHECNIMSNGGPVESIANLATGQDRGNAVTIQAMKL
KEDMWILQDTCTNAYESTVVYAPIDIGGMKSVMTGRDSSNVAVLPSGFSILPDGLESRSL
VITSRPEEKCTGGGSLLTVLYQILTSNSPAVKLSKESVESVNNLISCTLHRIKTSLQCED
G

Transcript Sequence

Gene sequence data has not been registered.